Thanks for that bit of advice and I do that with items that would apply to a style sheet setting. This particular change is a change to a small bit of java script code that had to be made and unfortunately can't be controlled through a style sheet. It is not for all the links on the page, but only for the Kontera link color so can't be a global sheet type change.
The way you are refer to is the same as I mentioned in the manner that PHP would do it also. With a DWT, as far as I can tell it doesn't allow for that. This little snippet of code like I mentioned in the earlier post is to change the color of a "link" for Kontera, a is a self contained style if you will in the java script but it is part of the DWT, as it appears on every page.
Seems to me that Microsoft could have found a way to do this or I'm hoping there is already and I just don't know it. Luckily with high speed cable it still only takes about 10 minutes to republish the 400+ pages, but after 5 times it was getting tiresome. It still seems there should be an easier way.